PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lsa003521
Organism
Lactuca sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
Family bZIP
Protein Properties Length: 147aa    MW: 16490.6 Da    PI: 10.0394
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Lsa#S58677922PU_refUnigeneView CDS
PUT-187a-Lactuca_sativa-53254PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.11.9e-0859971250
               HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1 12 kNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
                NR+A r++R++Kka+ + Lee+vk+L   N+ L+ +l+
  Lsa003521 59 GNRVAVRKYREKKKAQNAYLEEEVKKLRVANRGLIRKLQ 97
               5*********************************98875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-945116No hitNo description
PfamPF077161.3E-859105IPR004827Basic-leucine zipper domain
CDDcd146866.02E-66097No hitNo description
SuperFamilySSF579591.91E-560114No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MEDGETEFSD HHTGNSSNTC STPPKLETSL LEGTMKKRRT ITKTHTDDHA SVKPAKSSGN  60
RVAVRKYREK KKAQNAYLEE EVKKLRVANR GLIRKLQIQA ALEAEAVRLR RLLLNLKAQI  120
GYELSVSPFY KQNCNGSSDG CSGRDEQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023766081.11e-105basic leucine zipper 24-like
TrEMBLA0A2J6L8M51e-103A0A2J6L8M5_LACSA; Uncharacterized protein
STRINGEOY175523e-29(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51960.11e-14basic leucine zipper 24