PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Lsa009834

Organism

Lactuca sativa

Taxonomic ID

4236

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca

Family

VOZ

Protein Properties

Length: 302aa MW: 33054.9 Da PI: 4.7531

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Lsa#S58680187	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	220.9	3.2e-68	179	301	1	125
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsl 100 pppsaflgpkc+lwdc+rpaqg w+ dycss+ha++a eg pg++pv+rpkgi+lkd+llfaal+ak qgk+vg+pec+gaatakspwna++lfd+++ Lsa009834 179 PPPSAFLGPKCSLWDCPRPAQG--WCPDYCSSLHAAVAQTEGCPGMKPVIRPKGIELKDNLLFAALTAKSQGKNVGVPECQGAATAKSPWNAPDLFDIAV 276 89*****************9..9*********************************************************************** PP VOZ 101 legetirewlffdkprrafesgnrk 125 +ege +rewlffdkprrafesgnrk Lsa009834 277 FEGEMVREWLFFDKPRRAFESGNRK 301 **********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence Send to blast
MGKGTKGKSG SHQILKDRAK NRVEDLHGMF TDLQSARKES RGIDVAVLEE QVNQMLKEWK 60 NELNEPSPAS SLQQGASFGL SSPDISKLLQ LCEEEDDATS GLAPPKPDPD ALETGENAAF 120 HKKEQESKST GQSKGSPSGI EIERELDYFS FDDNNNNIII QEGNDDLLPM MSFLPNISPP 180 PSAFLGPKCS LWDCPRPAQG WCPDYCSSLH AAVAQTEGCP GMKPVIRPKG IELKDNLLFA 240 ALTAKSQGKN VGVPECQGAA TAKSPWNAPD LFDIAVFEGE MVREWLFFDK PRRAFESGNR 300 KX

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023764032.1	0.0	transcription factor VOZ1-like isoform X1
Refseq	XP_023764033.1	0.0	transcription factor VOZ1-like isoform X1
Refseq	XP_023764034.1	0.0	transcription factor VOZ1-like isoform X1
Swissprot	Q9SGQ0	1e-119	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2J6LDB6	0.0	A0A2J6LDB6_LACSA; Uncharacterized protein
STRING	cassava4.1_006671m	1e-133	(Manihot esculenta)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-120	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]