 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lsa017783 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
|
| Family |
G2-like |
| Protein Properties |
Length: 324aa MW: 35349 Da PI: 6.0428 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Lsa#S58687483 | PU_ref | Unigene | View CDS |
| PUT-187a-Lactuca_sativa-29647 | PU_unref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 92.9 | 2.7e-29 | 154 | 205 | 3 | 55 |
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
rl+Wtp+LH+rFve+v++L G ++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
Lsa017783 154 RLVWTPQLHKRFVEVVAHL-GVKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 205
9******************.9*******************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MGEEVRITDF DVSGGDDDDR VSEWEAGLPN VDDLPSLSQL LISAEMASAF SITPGPHRSM 60
IDVDRASRNT ISSLQGQSQQ NQVNKHTDFK SFSDDREEEM VVEGEETVDL TPDGSDSRKL 120
RRVDSGGASG GAGEEADSAL RADDSSTKSL KRIRLVWTPQ LHKRFVEVVA HLGVKNAVPK 180
TIMQLMNVEG LTRENVASHL QKYRLYVKRM HGSSNEGPSS SDPLFASATV PKSFHDSGGN 240
GGVGNRNGHS HVPIPMPYPQ QMVPLAYPPP QMVPNRSGGG GSAYHQGFSP HSHPYNMMMQ 300
PRDWSGNNFG SVSPFHQSRT PNDN
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that is essential for the generation of the circadian clock oscillation. Is necessary for activation of CCA1 and LHY expression. Is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter. Directly regulates the expression of PRR9, a major component of the morning transcriptional feedback circuit, by binding specific sites on PRR9 promoter. Binds to its own promoter, inducing a negative auto-regulatory feedback loop within the core clock. Binds to ELF3 and associates with ELF4 in a diurnal complex which is required for the expression of the growth-promoting transcription factors PIF4 and PIF5 and subsequent hypocotyl growth in the early evening. {ECO:0000269|PubMed:16006522, ECO:0000269|PubMed:16164597, ECO:0000269|PubMed:21236673, ECO:0000269|PubMed:21753751, ECO:0000269|PubMed:22311777}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Circadian oscillation with peaks at subjective dusk. {ECO:0000269|PubMed:16006522, ECO:0000269|PubMed:16164597, ECO:0000269|PubMed:17132630, ECO:0000269|PubMed:21753751}. |
