PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Lsa019207

Organism

Lactuca sativa

Taxonomic ID

4236

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca

Family

bZIP

Protein Properties

Length: 164aa MW: 18306.6 Da PI: 5.6935

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Lsa#S58682180	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.8	3e-10	34	92	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+ +NRe+ArrsR R+++ +e L +L + N+ + ++++ +++ ++++e+ Lsa019207 34 RKRKRMVSNRESARRSRMRRQKHLEDLMIQLSQLRKDNSLVIANVSTTIQHYTSVETEN 92 678999********************************988888888777777776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.8E-10	24	113	No hit	No description
SMART	SM00338	1.7E-12	30	94	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.599	32	95	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.03E-9	34	85	No hit	No description
Pfam	PF00170	1.8E-7	34	88	IPR004827	Basic-leucine zipper domain
CDD	cd14702	7.12E-16	35	85	No hit	No description
PROSITE pattern	PS00036	0	37	52	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence Send to blast
MASSSGTATT SSGGSYPLQI SGSDEDIQQL MDQRKRKRMV SNRESARRSR MRRQKHLEDL 60 MIQLSQLRKD NSLVIANVST TIQHYTSVET ENSVLRAQVA ELSHRLESLN QIMALMNQPI 120 DAGCGFVEEQ YGMGGTELID EFMVNSLSSF YANQPILASA DMIQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	54	RKRKRMVSNRESARRSRMRRQK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023769704.1	1e-118	bZIP transcription factor 11-like
TrEMBL	A0A2J6L130	1e-117	A0A2J6L130_LACSA; Uncharacterized protein
STRING	XP_010105351.1	2e-50	(Morus notabilis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	6e-31	basic leucine-zipper 44