PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10004206
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family NAC
Protein Properties Length: 223aa    MW: 24856 Da    PI: 10.3579
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10004206genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.31.4e-107110296127
          NAM  96 kgelvglkktLvfykgrapkgektdWvmheyr 127
                   + + g k+t+vfykg+apkg+kt+W +hey+
  Lus10004206  71 VEVALGEKRTMVFYKGKAPKGRKTHWKIHEYK 102
                  456799*************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100511.891132IPR003441NAC domain
SuperFamilySSF1019414.32E-1171132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MAFHFSAQNC QQAEIGRRWR KGKISSGSSL GGCKRGKEEE GGRSGLLGAG IGKPRVHLAT  60
STAVVVLIIN VEVALGEKRT MVFYKGKAPK GRKTHWKIHE YKAFVNPQHQ QQQQQQSLQL  120
RHEYSLIRLY KKSRCLRSLD RRPVGIFQLQ PISTTSTTAS TSTAHSHTNN QLLLNITTPP  180
ADQQADRNDD DAAAANHRDR EPSGFWGYLQ ELDLHFNGDD NL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10004206
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100042061e-167(Linum usitatissimum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.29e-15NAC domain containing protein 61