PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10006385
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family SAP
Protein Properties Length: 107aa    MW: 10947.9 Da    PI: 5.5308
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10006385genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP84.71.2e-261094280
          SAP  2 ssssssssseseegseggeggdass......gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvc 80
                 sssssssss +++ ++gg g    +      +++egps+sr+r ++evwpePflealat++a da+ ++Grl+aa+al nvfqv 
  Lus10006385 10 SSSSSSSSSGNDNNHDGGGGARVVGssagrgDDYEGPSRSRPRGVYEVWPEPFLEALATHIAADAALFSGRLSAAQALSNVFQVP 94
                 555555555555555554444333356688899**************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MSSSLPPLPS SSSSSSSSGN DNNHDGGGGA RVVGSSAGRG DDYEGPSRSR PRGVYEVWPE  60
PFLEALATHI AADAALFSGR LSAAQALSNV FQVPRHFGQL NFSLDA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10006385
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012081526.12e-19transcriptional regulator STERILE APETALA
TrEMBLA0A067K1B34e-18A0A067K1B3_JATCU; Uncharacterized protein
STRINGLus100063852e-69(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146