PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10008896
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bHLH
Protein Properties Length: 214aa    MW: 24137.6 Da    PI: 10.7793
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10008896genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.90.000436372253
                 HHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
          HLH 22 eLrellPkaskapskKlsKaeiLekAveYIks 53
                 +Lr++l k  + p  +++ a+ L+kAv+Y+ks
  Lus10008896  6 QLRTVLKKTKNKPTNRNNRASWLQKAVKYLKS 37
                 8999999976888899*************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MASKAQLRTV LKKTKNKPTN RNNRASWLQK AVKYLKSDSY LFGPLLDPSP STTNNGCSSV  60
HTPRFLWFRR KSTKGLIGDN VMEYLKSDSY LYGPFLLNQR PNDCNLKKVM SKDKNKYSSV  120
FEPSNVTVEN KLLHEEEDDD GGDVVLPLTP ERNHINGGHQ RQKKSVRRKE MVTVTHMVRR  180
SSRSSPSSAV SGMTGKKSIP DPPSRSRMLA VER*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10008896
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100088961e-156(Linum usitatissimum)