PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10016884
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 141aa    MW: 15873.6 Da    PI: 4.8974
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10016884genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.21e-091046440
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40
                  k+ +r+++NRe+ArrsR RK+++ie L  + ++Le 
  Lus10016884 10 EKKRKRMISNRESARRSRMRKQKQIEDLIAEKAVLER 46
                 6999************************999888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-11771IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.1E-11891No hitNo description
PROSITE profilePS502179.772972IPR004827Basic-leucine zipper domain
PfamPF001703.0E-81048IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.11E-81157No hitNo description
CDDcd147026.08E-131263No hitNo description
PROSITE patternPS0003601429IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MSAAAAIDEE KKRKRMISNR ESARRSRMRK QKQIEDLIAE KAVLERSLSE ANQKLSGLWQ  60
RYRHLEAENE SLRDEMARLT EYSASLNRML ASYNGTESGM DDDVSDGKDV EEAASTAAFQ  120
NPWSDFTVQS SSAQLVTDCF *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12330RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10016884
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002314935.13e-32basic leucine zipper 1
TrEMBLA0A3G1CGI78e-31A0A3G1CGI7_POPCN; BZIP transcription factor
TrEMBLB9HWY98e-31B9HWY9_POPTR; Uncharacterized protein
STRINGLus100168849e-98(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15536812
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49450.14e-21basic leucine-zipper 1