PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10017283
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 175aa    MW: 19517.3 Da    PI: 9.8708
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10017283genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.47.4e-0993114728
                  HHCHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   7 errkqkNReAArrsRqRKkaei 28 
                   +r++kNRe+A rsR+RK++ i
  Lus10017283  93 HKRRIKNRESADRSRARKQELI 114
                  59*****************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-1284148No hitNo description
SMARTSM003380.003384164IPR004827Basic-leucine zipper domain
PfamPF077161.3E-490111IPR004827Basic-leucine zipper domain
CDDcd147075.85E-1493144No hitNo description
PROSITE patternPS00036094109IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MEQVWQDISM CPLQDNSTPP PPAATQGHQI GNLHDFFTAA DRTPPEPPIS QKGITFPPFS  60
HLVGSPVFQG ISSPTMVGSK PADKKSLSGE QWHKRRIKNR ESADRSRARK QELIPLYSLF  120
SFSSSAYTQE LELKVDQLKK ENAKLRRLLH LELEVVGAEL PKKNTLCRTL TAPF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10017283
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100172831e-126(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37553252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.15e-15bZIP family protein