PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10017284
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 156aa    MW: 17457.7 Da    PI: 10.2582
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10017284genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.4e-1090137747
                  HHCHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   7 errkqkNReAArrsRqRKka.......eieeLeekvkeLeaeNkaLkk 47 
                   +r++kNRe+A rsR+RK++       +++eLe kv+ L++eN +L+ 
  Lus10017284  90 HKRRIKNRESADRSRARKQEliplssaYTQELELKVDRLTKENARLRR 137
                  59****************96444444489*****************94 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.8E-781155IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-1288151No hitNo description
PfamPF001702.0E-790137IPR004827Basic-leucine zipper domain
CDDcd147074.43E-1890141No hitNo description
SuperFamilySSF579599.64E-791149No hitNo description
PROSITE patternPS00036091106IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MEQVWQDISL CPLQDNSRTP QTAVTQRHQT GNLHDFFTAA DRSPPEAPIP QKGISSFPPF  60
PVFPAISAPQ GMGSIPADGD KKSLSGEQWH KRRIKNRESA DRSRARKQEL IPLSSAYTQE  120
LELKVDRLTK ENARLRRLLH LVGYPNTNLQ SMISS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10017284
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100172841e-112(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37553252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.13e-13ABA-responsive element binding protein 3