PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10018591
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family NAC
Protein Properties Length: 107aa    MW: 11849.5 Da    PI: 9.7324
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10018591genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM25.34.3e-081171666
          NAM  6 rFhPtdeelvveyLkkkvegkk..leleevikevdiy.kvePwdLpkkvkaeekewyfFskrdk 66
                  F+P++++lv +yL  k++g++  ++ +e+i+e+diy +++Pw++  +  +e+ + y F++ ++
  Lus10018591 11 NFDPSEKDLV-NYLWLKLNGQTipIPSNEFIPEIDIYgQLKPWEMFDR--NESARFYAFACLKS 71
                 6*********.9**********55556678******9456*****622..33345666665443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-61176IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MAAAGVNLRR NFDPSEKDLV NYLWLKLNGQ TIPIPSNEFI PEIDIYGQLK PWEMFDRNES  60
ARFYAFACLK SRGGRRLRCP GVSAVPPAAE RGSSRTAPCS QRTAGF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10018591
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100185911e-73(Linum usitatissimum)