PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10019542
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 270aa    MW: 31084.5 Da    PI: 9.8676
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10019542genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1414.3e-13188241558
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                  +r rr++kNRe+A rsR+R++a++ eLe + ++L++eN +L+++le  +++ +k
  Lus10019542 188 RRHRRMIKNRESAARSRARRQAYTLELELELDSLKEENIRLRQTLEAEENNKEK 241
                  699***************************************999876666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-8184248IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.576186233IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.88E-9188240No hitNo description
PfamPF001702.9E-11188247IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-11188238No hitNo description
PROSITE patternPS000360191206IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MNGVPRDKSF WTLTLNEIER KNGRNLGSMS MDDFLTHLLN LENLDDEYTA AHRPVQLPQP  60
PNYNINNNGS NQLPRRPFMG APPLLQQPYF PIPSPMYKKT VGDVWFEIQR EQNPANNVAV  120
VPPPERQQSF GEMTLEDFLV LAGVVRKKVV QPTLDQVLVE TVPSRPSEEV MIPAENDVPR  180
ARYFAGERRH RRMIKNRESA ARSRARRQAY TLELELELDS LKEENIRLRQ TLEAEENNKE  240
KVVKMKKEGP KPKKADKVEG IRRTTSMSW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10019542
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100195420.0(Linum usitatissimum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.14e-18bZIP family protein