PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10029784
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 338aa    MW: 36796.4 Da    PI: 5.123
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10029784genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.74.5e-07243265325
                  XXCHHHCHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKk 25 
                  + +r++r++kNRe+A rsR+RK+
  Lus10029784 243 AQQRQKRMIKNRESAARSRERKQ 265
                  679*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-9239265No hitNo description
PROSITE patternPS000360248263IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-9306328No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MASSKVMAFS KPKNSDLAST TSSNSATRSR RFSSSSSSSS ATTTTVHHRS SHHTYIGNSS  60
SSNMTVDGIS HNVYSAPPSD SALLDAPLTL IDSPTPPPLA TAIDSNGGGC GTNDQEMATD  120
VVPAQGSKTV DEMWREIVSG RKELKEEPDE MMTLEDFLAK AGAVDDEDEV KMPQLHPERL  180
SGGIFGFDPV PMPTNAISML DNVEGSIIGF GNGVELPHGS GELRVERGKR GRAPVLEQLD  240
KAAQQRQKRM IKNRESAARS RERKQVTDVF PFDAMMLNSN YCLDFVRLIV GINSISVILF  300
LWWLQAYQVE LESLAVKLEE EHEQLLKEKV PAFIPSL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10029784
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012080743.16e-90G-box-binding factor 4 isoform X1
RefseqXP_012080744.15e-90ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X2
TrEMBLA0A067KEV01e-88A0A067KEV0_JATCU; Uncharacterized protein
STRINGLus100297840.0(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.11e-44bZIP family protein