PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10031817
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family EIL
Protein Properties Length: 586aa    MW: 65396.3 Da    PI: 5.4498
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10031817genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3431.48.8e-132383821322
                  XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkek 98 
                  +el++rmwkd+++l+r+ker++ +   ++ a++++k +++++qa+rkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWWkek
  Lus10031817  38 DELERRMWKDRVKLQRIKERRRISA--QQ-AAEKQKPKHTSDQAKRKKMSRAQDGILKYMLKLMEVCQARGFVYGIIPEKGKPVSGASDNIRAWWKEK 132
                  79******************99754..44.599***************************************************************** PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.---- CS
         EIN3  99 vefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppyk 196
                  v+fd+ngpaai+ky+a++l+++++++   ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+wwg+lgl+  q  ppyk
  Lus10031817 133 VKFDKNGPAAIAKYEAECLAMNEGDNA--RQGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGDEDWWGKLGLPGGQT-PPYK 227
                  ********************9988877..789999******************************************************9987.**** PP

                  -GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.......XXXX..XXXXXXXXXXXXXXXX CS
         EIN3 197 kphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.......slrk..qspkvtlsceqkedve 285
                  kphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l+vl++ee+ +++ s+++           +  ++++  +s+++++dve
  Lus10031817 228 KPHDLKKVWKVGVLTAVIKHMSPNIAKIRKHVRQSKCLQDKMTAKESAIWLAVLSREESVIRQPSSDNGtsgitevP--RggRKKQPAVSDDSDYDVE 323
                  *******************************************************************4444566542..1458888999********* PP

                  XXXXXX.XXXXXXXXXX.......................XXXXXXXXXXXXXXXXXXXX CS
         EIN3 286 gkkeskikhvqavktta.......................gfpvvrkrkkkpsesakvss 322
                  g ++   + +++++  +                         +  rkrk+ p++++k s+
  Lus10031817 324 GVDDGVGSVSSKDSMSNhpmdveppsnlrddsphpvqekeRREKPRKRKR-PRDKSKDSE 382
                  66666656666666666777799999999988776666544444444443.333333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.7E-12638285No hitNo description
Gene3DG3DSA:1.10.3180.102.5E-71160293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.12E-61166288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    Send to blast
MGELEEIAAD ICSEIDADEL KCDNLAEKDV SDEEIEPDEL ERRMWKDRVK LQRIKERRRI  60
SAQQAAEKQK PKHTSDQAKR KKMSRAQDGI LKYMLKLMEV CQARGFVYGI IPEKGKPVSG  120
ASDNIRAWWK EKVKFDKNGP AAIAKYEAEC LAMNEGDNAR QGNSQSVLQD LQDATLGSLL  180
SSLMQHCDPP QRKYPLEKGV PPPWWPTGDE DWWGKLGLPG GQTPPYKKPH DLKKVWKVGV  240
LTAVIKHMSP NIAKIRKHVR QSKCLQDKMT AKESAIWLAV LSREESVIRQ PSSDNGTSGI  300
TEVPRGGRKK QPAVSDDSDY DVEGVDDGVG SVSSKDSMSN HPMDVEPPSN LRDDSPHPVQ  360
EKERREKPRK RKRPRDKSKD SEQQPGPSTN DGHFLLEQRA SLPDMDHTHI RALEPQMHAV  420
DLGINTNVTT MPLGEGLEGE PNFNIPEFNY LSDIPPGSGE NICLDGRQQL YPLAQSSDMF  480
HGSSYNFYAP TVNFGPAHGV EQQTHLPMDA SHIRQEGDGF QVSAIPMNEN EIPGGDLQNF  540
AKDIFPSGQD RYLGSPFDSV SLDFGDFSSP CDFDMDKDLL KCYGA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A5e-731652969140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1366374KPRKRKRPR
2367373PRKRKRP
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10031817
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002299248.20.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A1Q3C8870.0A0A1Q3C887_CEPFO; EIN3 domain-containing protein
STRINGLus100318170.0(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-170ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]