PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10031884
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family ZF-HD
Protein Properties Length: 90aa    MW: 9096.19 Da    PI: 8.5023
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10031884genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer28.73.2e-09829425
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGC 25
                  +YkeCl+NhAaslG++a+ G 
  Lus10031884  8 EVYKECLRNHAASLGSYATGGW 29
                 58****************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047701.5E-5928IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257746.0E-41030IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MEGEVDAEVY KECLRNHAAS LGSYATGGWG GVSSPFPFSL PLPPSPPPSN APPVAATATS  60
TAKSTTTKPT PASSSPVPPS SMTNIRLRQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10031884
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100318842e-56(Linum usitatissimum)