PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10033630
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 310aa    MW: 34506.7 Da    PI: 6.3772
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10033630genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.87.6e-11179222548
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                  kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  +
  Lus10033630 179 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 222
                  8999********************************98877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-13175239IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.622177229IPR004827Basic-leucine zipper domain
PfamPF001702.6E-9179223IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.89E-11179233No hitNo description
Gene3DG3DSA:1.20.5.1704.7E-13179230No hitNo description
CDDcd147032.84E-23180230No hitNo description
PROSITE patternPS000360182197IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MAQLPPKIPT LPSWPDLSSD QKPHSAAAQP PSSAAAANNN HPSWVDEFLD FSSARRGTHR  60
RSASDSIAFL ETPLMTLDDD CRGGGGGRSS NNNGGSNNNH HNLQRHGQHD FDKFDDEQFM  120
SMFSVDDMSS NPGGSNSDDH DSINDDKEAA TTTGQSEDNS QQTTPSKGDN NGDRIFDPKR  180
VKRILANRQS AQRSRVRKLQ YISELERSVT SLQAEVSVLS PRVAFLDHQR LLLNVDNSAI  240
KQRIAALAQD KIFKDAHQEA LKREIERLRQ VYQHQSNKKM DHQTEQISNE PTPMTSTVDN  300
QKEQQLLQV*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10033630
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012079033.11e-117basic leucine zipper 61
SwissprotQ9M2K49e-98BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A067K9X81e-116A0A067K9X8_JATCU; Uncharacterized protein
STRINGLus100336300.0(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.17e-66bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]