PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10037750
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 140aa    MW: 15678.4 Da    PI: 5.0664
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10037750genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.82.6e-091046440
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40
                  k+ +r+++NRe+ArrsR RK++ ie L  + ++Le 
  Lus10037750 10 EKKRKRMISNRESARRSRMRKQKLIEDLIAEKAALER 46
                 6999************************888887764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.0E-11771IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-10891No hitNo description
PROSITE profilePS502179.622972IPR004827Basic-leucine zipper domain
PfamPF001702.8E-71047IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.37E-81155No hitNo description
CDDcd147026.83E-131263No hitNo description
PROSITE patternPS0003601429IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006521Biological Processregulation of cellular amino acid metabolic process
GO:0009267Biological Processcellular response to starvation
GO:0009617Biological Processresponse to bacterium
GO:0009651Biological Processresponse to salt stress
GO:0009901Biological Processanther dehiscence
GO:0010182Biological Processsugar mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MSAAAVIDEE KKRKRMISNR ESARRSRMRK QKLIEDLIAE KAALERSLSE ANQKLSGLWQ  60
RYRHLEAENE SLRDEMTRLA EYSASLNRML ASYNGTESGM DDDVSDGNDV KEAATAGLQN  120
PWSDFTVQSS SAQLVADCF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12330RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10037750
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002314935.12e-31basic leucine zipper 1
TrEMBLA0A3G1CGI75e-30A0A3G1CGI7_POPCN; BZIP transcription factor
TrEMBLB9HWY95e-30B9HWY9_POPTR; Uncharacterized protein
STRINGLus100377501e-96(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15536812
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49450.14e-23basic leucine-zipper 1