PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_100577g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 201aa    MW: 22586.2 Da    PI: 5.1237
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_100577g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.84.2e-161968255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++kG+r +k +g+W +eIr p++   r++++lg++ tae+Aa+a++aa  +l+g
  MA_100577g0010 19 QFKGIRMRK-WGSWGSEIRTPKT---RAKIWLGSYKTAEQAARAYDAAVYCLRG 68
                    69*****99.**********965...4*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003808.1E-311982IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-181978IPR016177DNA-binding domain
PROSITE profilePS5103221.2321976IPR001471AP2/ERF domain
CDDcd000181.83E-261978No hitNo description
Gene3DG3DSA:3.30.730.101.3E-281978IPR001471AP2/ERF domain
PRINTSPR003675.4E-82031IPR001471AP2/ERF domain
PfamPF008477.7E-92068IPR001471AP2/ERF domain
PRINTSPR003675.4E-84258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MEKAPEELAH RACGQERHQF KGIRMRKWGS WGSEIRTPKT RAKIWLGSYK TAEQAARAYD  60
AAVYCLRGPN AKLNFPDSVP AIPSAFCLSR RQIQLVAARY ARDELPSSST SNSLSSQNSN  120
NKASDEPECP LRSSLVSETV LSSDTSQQIS EGRDMALWES QFHGMNLETL PPIAEALGLD  180
PIPTWQEEEE QDGYLWNLWE V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-161176672Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF0873310.0EF087331.1 Picea sitchensis clone WS02745_A05 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ADJ99e-59D5ADJ9_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.16e-33ERF family protein