PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10209922g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 132aa    MW: 14899 Da    PI: 10.4506
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10209922g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.3e-172372255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++kG+r +k +g+Wv+eIr p++   + r++lg+++t+e+Aa+a++ a  +l+g
  MA_10209922g0010 23 QFKGIRMRK-WGKWVSEIRMPNS---SGRIWLGSYDTPEKAARAYDFAVYCLRG 72
                      69*****99.**********933...49*********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.3E-282281IPR001471AP2/ERF domain
SMARTSM003805.3E-302386IPR001471AP2/ERF domain
CDDcd000182.96E-252382No hitNo description
SuperFamilySSF541712.55E-202382IPR016177DNA-binding domain
PROSITE profilePS5103220.9562380IPR001471AP2/ERF domain
PRINTSPR003677.9E-92435IPR001471AP2/ERF domain
PfamPF008475.9E-102472IPR001471AP2/ERF domain
PRINTSPR003677.9E-94662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MIKPSPNQNG HGRSENRSLK SRQFKGIRMR KWGKWVSEIR MPNSSGRIWL GSYDTPEKAA  60
RAYDFAVYCL RGSMAKFNFP YSPPEFPCAS SLSRPQIQAA AAKFAAEEFL LPLEEEAASS  120
STVRLFGSVI RY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1623811473Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1028092e-88BT102809.1 Picea glauca clone GQ02016_M05 mRNA sequence.
GenBankEF6778252e-88EF677825.1 Picea sitchensis clone WS02775_L09 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261769.12e-39PREDICTED: ethylene-responsive transcription factor ERF017-like
SwissprotQ9C5916e-37ERF16_ARATH; Ethylene-responsive transcription factor ERF016
TrEMBLB8LPP68e-58B8LPP6_PICSI; Uncharacterized protein
STRINGXP_010261769.16e-39(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.18e-35ERF family protein