PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10430850g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 235aa    MW: 26391.1 Da    PI: 4.5109
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10430850g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.59.2e-152775355
               AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       kG+r +k +g+Wv+eIr p++   r + +lg++ ta++Aa+a++ a  +l+g
  MA_10430850g0010 27 LKGIRLRK-WGSWVSEIRIPRS---REKLWLGSYPTAQQAARAYDVAVYCLRG 75
                      59***999.**********954...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.8E-262689IPR001471AP2/ERF domain
PROSITE profilePS5103220.3762683IPR001471AP2/ERF domain
PRINTSPR003673.7E-62738IPR001471AP2/ERF domain
SuperFamilySSF541714.77E-172785IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.8E-262784IPR001471AP2/ERF domain
CDDcd000186.81E-232885No hitNo description
PfamPF008477.1E-92875IPR001471AP2/ERF domain
PRINTSPR003673.7E-64965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MEKPSPQEHD HAHALDDEDR GQKCRQLKGI RLRKWGSWVS EIRIPRSREK LWLGSYPTAQ  60
QAARAYDVAV YCLRGSAAKF NFPNSVPDIP SASSLSRREI QLAAAKYALD KLPSSPPSLQ  120
ENDENNNIKA SEEAASSSRX XXXENNNIKA SEEAASSSRS ASVSETELWS DSHQILEEPE  180
LDLRECGSDG NYGLALNLER MPSIDDALAL ELIPSTWQEE EHMDMFVDPT ELWNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1326841473Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ADJ92e-62D5ADJ9_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.18e-33ERF family protein