PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10431706g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 176aa    MW: 19172.4 Da    PI: 9.5745
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10431706g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.35.8e-112292855
               AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++r++lg+f+taeeAa+a++ a+++l+g
  MA_10431706g0010  2 KTRVWLGTFDTAEEAARAYDSAARNLRG 29
                      589***********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.12E-17136No hitNo description
PROSITE profilePS5103213.828137IPR001471AP2/ERF domain
PfamPF008475.7E-7129IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-12138IPR016177DNA-binding domain
SMARTSM003803.5E-9143IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-18137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
KKTRVWLGTF DTAEEAARAY DSAARNLRGP KAKTNFVLSP IHRDSSRSRS AALLSDSVTR  60
AASGQIQDQR PLRPYFYSNQ DPAIISISCA PSALLSPVDN DQGASSCVTG GPPSQSPALE  120
NQAVPYKKRK LLFGIDLMRS RNSQQQQNDA EICNSSRRQA PFLLDLNLPP AANDVD
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM2022303e-32HM202230.1 Picea sitchensis isolate CR100 ethylene-responsive element binding factor-like protein mRNA, complete cds.
GenBankHM2022363e-32HM202236.1 Picea sitchensis isolate CR400 ethylene-responsive element binding factor-like protein mRNA, complete cds.
GenBankHM2022373e-32HM202237.1 Picea sitchensis isolate CR401 ethylene-responsive element binding factor-like protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NMP51e-54A9NMP5_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.11e-07ethylene response factor 7