PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10431722g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 246aa    MW: 27660.5 Da    PI: 8.7856
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10431722g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.26.8e-0958101755
                       HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                         Er+RR ++++ + +Lr+++Pk +      K++K +i+  A+ Y+ +Lq
  MA_10431722g0010  58 HTERKRRTKLKETLYKLRSVVPKiS------KMDKQSIVGDAISYVLDLQ 101
                       57*********************66......*****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.35E-950105No hitNo description
PROSITE profilePS5088813.80251100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-1454119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-857106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-658101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.3E-1359115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MDHQNSELWM YMDENSRQLE RDDNNPQIIG SNPSTKTYNS GGPVMQRQQQ RQTSKNLHTE  60
RKRRTKLKET LYKLRSVVPK ISKMDKQSIV GDAISYVLDL QKKVREIEDE IQALSSSKRP  120
DNSQVITAET TKPRTNTNSD SIKSADLKKS AVELIKHGKL LEVDICNVGE GGIYHVRIES  180
KKEAGGLVKL TRALESLPLH IMNSNICCFD EAILSTVTLN GSSMEIVGVD KLDDMIRQSI  240
ASAWMG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LRN66e-91B8LRN6_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5571678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.12e-24bHLH family protein