PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10431882g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 199aa    MW: 22503.2 Da    PI: 9.341
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10431882g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.8e-173382255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++kG+r +k +g+Wv+eIr p++   + +++lg++ tae+Aa+a++aa  +l+g
  MA_10431882g0010 33 QFKGIRMRK-WGKWVSEIRIPKS---KEKIWLGSYKTAEQAARAYDAAVYCLRG 82
                      58*****99.**********843...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.1E-303396IPR001471AP2/ERF domain
PROSITE profilePS5103221.3513390IPR001471AP2/ERF domain
SuperFamilySSF541713.86E-203392IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.1E-293392IPR001471AP2/ERF domain
CDDcd000182.21E-273392No hitNo description
PfamPF008471.1E-93482IPR001471AP2/ERF domain
PRINTSPR003671.7E-83445IPR001471AP2/ERF domain
PRINTSPR003671.7E-85672IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
YFQSQHVAFA SPNMEKHDAH ALQDDDRRQK RGQFKGIRMR KWGKWVSEIR IPKSKEKIWL  60
GSYKTAEQAA RAYDAAVYCL RGSAAKLNFP DSVPGIPSAS SLSRQQIQHA ATKYALDEIP  120
STSPSLHNNE AKKKPASPSR SSWISETDLS RNSQQISKDL DLDMWESLFN GTDSLNLDKF  180
PSIDEALASE LIPPWQQQQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1732901372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ADJ94e-66D5ADJ9_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-36ERF family protein