PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10432362g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 218aa    MW: 25224.2 Da    PI: 7.2939
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10432362g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.23.8e-29108165259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dgy+WrKYG+K vk+s++pr+YYrC+ ++C vkk ver+a+d+ +v++ Y g+Hnhe
  MA_10432362g0010 108 EDGYKWRKYGKKFVKNSPNPRNYYRCSDSNCDVKKTVERDAHDKGIVITSYLGRHNHE 165
                       8********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-3095167IPR003657WRKY domain
SuperFamilySSF1182901.57E-2699167IPR003657WRKY domain
PROSITE profilePS5081129.7102167IPR003657WRKY domain
SMARTSM007744.6E-31107166IPR003657WRKY domain
PfamPF031069.7E-23108165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MNEKAEAFEP SDFLDLEEDF NHSCKNEDAD DQAYNFNIVK TGPSIRREYA DSFPSNPPCI  60
RGLHLDHNST VIQTHPQETM TPKKSRKRKA ERALKYAFLT RSETDILEDG YKWRKYGKKF  120
VKNSPNPRNY YRCSDSNCDV KKTVERDAHD KGIVITSYLG RHNHESPCVI YNHESPCVVY  180
YIGKPETLQL PCRPTASPIL QHISPVCSYV PESFEQHH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22100167774WRKY transcription factor 1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.26e-30WRKY DNA-binding protein 57