PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10432800g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 154aa    MW: 17593.4 Da    PI: 11.4637
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10432800g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.91.6e-10108141240
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtae 40 
                       +y+GVr+++ rg+WvAeIr ps    r  r +lg+ +  +
  MA_10432800g0010 108 KYRGVRRRR-RGKWVAEIRNPS----RgVRLWLGTCDN-Q 141
                       7*****887.8*********84....36******9887.4 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381237.1E-184147IPR017392AP2/ERF transcription factor ERF/PTI6
Gene3DG3DSA:3.30.730.103.5E-13108142IPR001471AP2/ERF domain
PfamPF008471.5E-5108137IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-8108142IPR016177DNA-binding domain
PROSITE profilePS5103214.078108154IPR001471AP2/ERF domain
SMARTSM003801.5E-4108148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MPAPKNKNNM TIRASKKEKN GPLIRKIRLI CSDPDATDLS SDDELKPPVS QKRLVREIHI  60
PLNSSAGTKI QFKPKSRSKS KRKSKVPNKE NAVLFESASN VECAVSWKYR GVRRRRRGKW  120
VAEIRNPSRG VRLWLGTCDN QKSLQRSQAM AWDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-07cytokinin response factor 4