PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_10432937g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

G2-like

Protein Properties

Length: 352aa MW: 39598.1 Da PI: 6.6547

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_10432937g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.8	9.2e-32	257	310	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk+++elm+vk+Ltl+hvkSHLQ+YR+ MA_10432937g0010 257 PRMRWTSTLHAHFVHAVKLLGGHERATPKSVMELMNVKDLTLTHVKSHLQMYRT 310 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.38E-15	254	310	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	5.3E-28	255	310	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.7E-23	257	310	IPR006447	Myb domain, plants
Pfam	PF00249	7.1E-7	258	309	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence Send to blast
MEASSIPDLS LHISPPNTKV ALSTSYSFQN DGDHRLDSFN TRLSEEYSSK SSDGSKKSRQ 60 RDDDALLELS LASFDFQAGR AANGSYLDQH YSITINGFPL FEKPSGEKQG QKNICAQGLM 120 RLSGGQEDPR LIMSCLSGGE TRKAIEDASS LGLVDSYYGH DFEVSVNKED YRCSDEFLRD 180 NKTREAPFFR PYEGILMNRV MTPNHPHSLS DSEDHFQGIS SHPKEIHSCN PSPATISDSH 240 SCIKSRFMTK RRSMRAPRMR WTSTLHAHFV HAVKLLGGHE RATPKSVMEL MNVKDLTLTH 300 VKSHLQMYRT VKGIDKSACP SGHDESEALG TVDGKYFEDF TENEIEYCDR RQ

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence Send to blast

MEASSIPDLS LHISPPNTKV ALSTSYSFQN DGDHRLDSFN TRLSEEYSSK SSDGSKKSRQ  60
RDDDALLELS LASFDFQAGR AANGSYLDQH YSITINGFPL FEKPSGEKQG QKNICAQGLM  120
RLSGGQEDPR LIMSCLSGGE TRKAIEDASS LGLVDSYYGH DFEVSVNKED YRCSDEFLRD  180
NKTREAPFFR PYEGILMNRV MTPNHPHSLS DSEDHFQGIS SHPKEIHSCN PSPATISDSH  240
SCIKSRFMTK RRSMRAPRMR WTSTLHAHFV HAVKLLGGHE RATPKSVMEL MNVKDLTLTH  300
VKSHLQMYRT VKGIDKSACP SGHDESEALG TVDGKYFEDF TENEIEYCDR RQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-16	258	312	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-16	258	312	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	9e-17	258	312	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	9e-17	258	312	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	9e-17	258	312	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	9e-17	258	312	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-16	258	312	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-16	258	312	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-16	258	312	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-16	258	312	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-16	258	312	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-16	258	312	4	58	Protein PHOSPHATE STARVATION RESPONSE 1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP570	15	80

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.2	3e-38	G2-like family protein