PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10433094g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 153aa    MW: 17117.4 Da    PI: 9.0899
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10433094g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.52.6e-162372255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++kG+r +k +g+Wv+eIr p++   + r++lg+++t+e+Aa a++ a  +l+g
  MA_10433094g0010 23 QFKGIRMRK-WGKWVSEIRMPNS---KGRIWLGSYDTPEKAAHAYDFAVYCLRG 72
                      69*****99.**********832...49********************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.0E-292281IPR001471AP2/ERF domain
PROSITE profilePS5103221.0082380IPR001471AP2/ERF domain
CDDcd000181.69E-252382No hitNo description
SuperFamilySSF541713.07E-202382IPR016177DNA-binding domain
SMARTSM003802.6E-312386IPR001471AP2/ERF domain
PRINTSPR003673.0E-82435IPR001471AP2/ERF domain
PfamPF008472.6E-92472IPR001471AP2/ERF domain
PRINTSPR003673.0E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MAKPSSNQIG HSRPKNRSLE SRQFKGIRMR KWGKWVSEIR MPNSKGRIWL GSYDTPEKAA  60
HAYDFAVYCL RGSKAKFNFP YSLPEIPYAA SLSPPQIQAA AAKFSAEEIR PPSEANATFS  120
SSCSKAESSI EGQEISVEQD LTFWDLVLED LAI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-152083266ATERF1
3gcc_A3e-152083266ATERF1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1028091e-110BT102809.1 Picea glauca clone GQ02016_M05 mRNA sequence.
GenBankEF6778251e-110EF677825.1 Picea sitchensis clone WS02775_L09 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261769.12e-39PREDICTED: ethylene-responsive transcription factor ERF017-like
RefseqXP_022730929.16e-39ethylene-responsive transcription factor ERF017-like
TrEMBLB8LPP61e-68B8LPP6_PICSI; Uncharacterized protein
STRINGXP_010261769.19e-39(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.12e-37ERF family protein