PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10433425g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 240aa    MW: 25819.6 Da    PI: 4.7333
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10433425g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.45.5e-11193235149
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 
                       s+ykGV   + +grW A+I++      ++r++lg+f  +++Aa+a+++a
  MA_10433425g0010 193 SQYKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNHEQDAARAYDRA 235
                       78****9888.8*********3.....5**********99*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.7E-12193237IPR016177DNA-binding domain
PfamPF008472.7E-6194235IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-15194236IPR001471AP2/ERF domain
PROSITE profilePS5103215.422194240IPR001471AP2/ERF domain
SMARTSM003803.0E-9194240IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MMTCLRASTL AMPYSGIEFG DAAGFEPDVN CVVDFVIDVR STLEIGRQGT AMEKSSYSAV  60
AVSTQEPPYN FLKVVGNDNK RLSLGRCYSP VEAEISANLS ELNCNSTIFK KAMGTDSTRA  120
DSEEAGSLTE DHDSDSSLVA AGKAISSNAS SSLADRAELE GMGSGISAVS SENIHITPSV  180
QGDQEKCKKL PSSQYKGVVP QPNGRWGAQI YEKHQRVWLG TFNHEQDAAR AYDRAXXXXT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25560.13e-23RAV family protein