PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_104992g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 239aa    MW: 25937.1 Da    PI: 9.0222
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_104992g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.51e-15149456
             AP2  4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +GVr ++ +gr++AeI dp +   +kr +lg+f+t eeAa+ +++ +++++g+
  MA_104992g0010  1 RGVRKRP-WGRYAAEITDPLT---KKRKWLGTFDTGEEAAREYDKVARNMRGA 49
                    8******.**********743...4*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.46E-27157No hitNo description
SMARTSM003802.1E-26162IPR001471AP2/ERF domain
PROSITE profilePS5103220.481156IPR001471AP2/ERF domain
SuperFamilySSF541714.51E-18157IPR016177DNA-binding domain
PfamPF008471.0E-10148IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.9E-26156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
RGVRKRPWGR YAAEITDPLT KKRKWLGTFD TGEEAAREYD KVARNMRGAN AKTNFPAPSP  60
HLENLVHNQS STTTVATSLP APPLSSTPAN HRKIKNKTSA SSGVAEQMEP WTRVYVNEGA  120
ADHNMNRSTK TTIPFPHNLV DYATLLQQLP VGVSLLGEIV GSQMMKRHGG HDWLGVGLVN  180
SFLPAAAQTS ACESSSSSGL VDTQLSPPPP TKEKATLRSI DLNEDDEDER SPSLTLSLG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-161561672Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1323RKRPWGRYAAEITDPLTKKRK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1076910.0BT107691.1 Picea glauca clone GQ03111_J02 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.12e-26DORNROSCHEN-like