PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_10844g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

VOZ

Protein Properties

Length: 372aa MW: 42311.1 Da PI: 7.3145

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_10844g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	389.7	7.4e-120	167	366	1	200
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 ppp+aflgpkcalwdc+rpaq sew+q+ycs fh alneg+pg+ pvlrp+gidlkd+llfaal ak+ gk vgipecegaatakspwna+elf MA_10844g0010 167 PPPAAFLGPKCALWDCPRPAQRSEWCQEYCSIFHGIAALNEGTPGMIPVLRPGGIDLKDALLFAALGAKTMGKAVGIPECEGAATAKSPWNAPELF 262 89******************************************************************************************** PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvde 192 dl +l+ge +rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmk++gg krsyymdpqpss+fewhl+eye+n++da+ lyrlelk+vd+ MA_10844g0010 263 DLFFLQGEVVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKDLGGVKRSYYMDPQPSSQFEWHLFEYEMNNCDACVLYRLELKQVDS 358 ******************************************************************************************** PP VOZ 193 kksakgkv 200 kk++kg+ MA_10844g0010 359 KKNTKGRW 366 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence Send to blast
MGKRSKSTSK STAHQLLKTK AKNRVDDLQE MFTDLQQARK ESRVSDAVVL EEQVHQLLRE 60 WKVELHEASP ATSLLAASLC SSGLSSDMWR LLQLHEEEDD ATSVLAEPCS PELHLHKTIP 120 EDANPTSFHE DFFVDHVKTQ VQTIDGTSRL RKKQYLNFKV HAQEFRPPPA AFLGPKCALW 180 DCPRPAQRSE WCQEYCSIFH GIAALNEGTP GMIPVLRPGG IDLKDALLFA ALGAKTMGKA 240 VGIPECEGAA TAKSPWNAPE LFDLFFLQGE VVREWLFFDK PRRAFESGNR KQRSLPDYSG 300 RGWHESRKQV MKDLGGVKRS YYMDPQPSSQ FEWHLFEYEM NNCDACVLYR LELKQVDSKK 360 NTKGRWATTL DR

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence Send to blast

MGKRSKSTSK STAHQLLKTK AKNRVDDLQE MFTDLQQARK ESRVSDAVVL EEQVHQLLRE  60
WKVELHEASP ATSLLAASLC SSGLSSDMWR LLQLHEEEDD ATSVLAEPCS PELHLHKTIP  120
EDANPTSFHE DFFVDHVKTQ VQTIDGTSRL RKKQYLNFKV HAQEFRPPPA AFLGPKCALW  180
DCPRPAQRSE WCQEYCSIFH GIAALNEGTP GMIPVLRPGG IDLKDALLFA ALGAKTMGKA  240
VGIPECEGAA TAKSPWNAPE LFDLFFLQGE VVREWLFFDK PRRAFESGNR KQRSLPDYSG  300
RGWHESRKQV MKDLGGVKRS YYMDPQPSSQ FEWHLFEYEM NNCDACVLYR LELKQVDSKK  360
NTKGRWATTL DR

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT115389	0.0	BT115389.1 Picea glauca clone GQ03615_G11 mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010924399.1	1e-166	transcription factor VOZ1 isoform X2
Swissprot	Q9SGQ0	1e-155	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	W1Q0P1	1e-164	W1Q0P1_AMBTC; Uncharacterized protein
STRING	ERN14021	1e-165	(Amborella trichopoda)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP2327	13	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-150	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]