PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_108992g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 192aa    MW: 21722.3 Da    PI: 4.5612
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_108992g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.89.7e-172372255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++kG+r +k +g+Wv+eIr p+    +  r++lg+++t+e+Aa+a++ a  +l+g
  MA_108992g0010 23 QFKGIRMRK-WGKWVSEIRMPN----StGRIWLGSYDTPEKAARAYDFAVYCLRG 72
                    69*****99.**********93....259********************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.1E-292282IPR001471AP2/ERF domain
SuperFamilySSF541716.47E-202382IPR016177DNA-binding domain
PROSITE profilePS5103221.1142380IPR001471AP2/ERF domain
CDDcd000181.87E-272382No hitNo description
SMARTSM003803.7E-312386IPR001471AP2/ERF domain
PfamPF008471.1E-92472IPR001471AP2/ERF domain
PRINTSPR003671.3E-82435IPR001471AP2/ERF domain
PRINTSPR003671.3E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MAKPSQNQNG PNRRENRSLK SRQFKGIRMR KWGKWVSEIR MPNSTGRIWL GSYDTPEKAA  60
RAYDFAVYCL RGSKAKFNFP HSPPEIHCVS SLSPPQIQAA AAKYAAGEFP LPSEDATFSS  120
SDLEAECGND GQEISAFWDS VLEDLDNDES LTLQDFQPLD MPMEDFGVLF QMTENWDLGG  180
FQNYFPLLEI LP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1623811473Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006843906.12e-39ethylene-responsive transcription factor ERF017
TrEMBLB8LPP61e-80B8LPP6_PICSI; Uncharacterized protein
STRINGERN055817e-39(Amborella trichopoda)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.12e-36ERF family protein