PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_113446g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 210aa    MW: 23558.5 Da    PI: 5.1473
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_113446g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.82.1e-162372255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++kG+r +k +g+Wv+eIr p++   r r++lg++ t+e Aa+a++ a  +l+g
  MA_113446g0010 23 QFKGIRMRK-WGKWVSEIRMPKS---RSRIWLGSYNTPETAARAYDFALYCLRG 72
                    79*****99.**********954...4***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.17E-282282No hitNo description
PROSITE profilePS5103221.2322380IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-282382IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-192382IPR016177DNA-binding domain
SMARTSM003802.1E-312386IPR001471AP2/ERF domain
PfamPF008472.8E-92472IPR001471AP2/ERF domain
PRINTSPR003671.9E-82435IPR001471AP2/ERF domain
PRINTSPR003671.9E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MAKPSPNQNS HSKLESRSLE SKQFKGIRMR KWGKWVSEIR MPKSRSRIWL GSYNTPETAA  60
RAYDFALYCL RGSEAKFNFP DSPPEIPCAS SLSPPQIQTA AAKFATEEFQ LPSEEDAAFS  120
RSVSKAERSN DGQEILAVTG RTFWDSVLLE CLESGKSLNL NDFPPLDLSM DYFGVLFQPR  180
EDWSQEGVSK SVFPVVEDSA MKVELSSTLN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-142080263ATERF1
3gcc_A3e-142080263ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026430012.12e-40ethylene-responsive transcription factor ERF017-like
TrEMBLA9NQM15e-81A9NQM1_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.12e-40ERF family protein