PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_130907g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 550aa    MW: 60968.6 Da    PI: 6.5608
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_130907g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.6e-10240276440
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                      k  rr+++NReAA++sR+RKka++++Le    +L++
  MA_130907g0010 240 AKTLRRLAQNREAAKKSRLRKKAYVQQLESSRMKLSQ 276
                     6889*************************98777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-5237317IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.082239283IPR004827Basic-leucine zipper domain
PfamPF001701.2E-7240280IPR004827Basic-leucine zipper domain
CDDcd147085.57E-21241292No hitNo description
SuperFamilySSF579593.66E-6241283No hitNo description
Gene3DG3DSA:1.20.5.1709.5E-7243275No hitNo description
PROSITE patternPS000360244259IPR004827Basic-leucine zipper domain
PfamPF141449.9E-33326400IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
METKPTKGSV PRPCFGRSSD RAQLVLQVQF VPSPKGFEEE EELGGCSMED REPNSQRRSS  60
PEISTWNKPM LYGMLQGIPS PYAANFVSSS GLESLKDHHG AYDLGELEQS LILNLDAEGD  120
HHPGLAERQG FGSRPATLNI FPSWPMRFEA SPKSTSQSAD STISGSAQYT ASACKADTQI  180
ELESPSSTRG QQEALQVSDM ANSSRTEISN ELEKDAQHET NRRAPASSSE QEAASKTLDA  240
KTLRRLAQNR EAAKKSRLRK KAYVQQLESS RMKLSQIEQD LQRARAQGIF LGAGFIGDQG  300
HPGLSSGAAI FDMEYSRWLE EHHGLMCELR AALQAHIPDN DLRLMLDNCL RHHDELFRLK  360
SIAAKADVFH LVSGMWKTPA ERCFMWMGGF RPSEILKILV PHLEPLTEPQ FVGICNLQQS  420
SQQAEEALLQ GMEALQHSLS ETIVSGSLSS PSNAGNYMEQ MAIAMGKLTN LEGFVRQADN  480
LRQQTLHQLH RILTIRQAAR CFLATGEYFT RLRALSSLWS ARPREQHLLD GSSSAATTMT  540
PASMNYFSTL
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ0930262e-94FJ093026.1 Pinus taeda isolate 6586 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930292e-94FJ093029.1 Pinus taeda isolate 6582 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930312e-94FJ093031.1 Pinus taeda isolate 6596 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930322e-94FJ093032.1 Pinus taeda isolate 6595 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930332e-94FJ093033.1 Pinus taeda isolate 6594 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930342e-94FJ093034.1 Pinus taeda isolate 6597 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930352e-94FJ093035.1 Pinus taeda isolate 6590 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930362e-94FJ093036.1 Pinus taeda isolate 6580 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930372e-94FJ093037.1 Pinus taeda isolate 6584 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930382e-94FJ093038.1 Pinus taeda isolate 6589 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930392e-94FJ093039.1 Pinus taeda isolate 6585 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930402e-94FJ093040.1 Pinus taeda isolate 6591 anonymous locus 2_3041_01 genomic sequence.
GenBankFJ0930422e-94FJ093042.1 Pinus taeda isolate 6592 anonymous locus 2_3041_01 genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001289788.10.0transcription factor TGA2
RefseqXP_010244798.10.0PREDICTED: transcription factor TGA2 isoform X1
RefseqXP_010244803.10.0PREDICTED: transcription factor TGA2 isoform X1
SwissprotQ52MZ21e-173TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0K0M7410.0A0A0K0M741_PINTB; ZIP2 (Fragment)
STRINGXP_010244798.10.0(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7221667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-144bZIP family protein