PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_134453g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 261aa    MW: 28865.5 Da    PI: 6.5268
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_134453g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-1958107255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+Wv+eIr+p++   ++r++lg+f+ta++Aa+a++ a+  l+g
  MA_134453g0010  58 TYRGVRRRS-WGKWVSEIREPKK---KTRIWLGSFDTADMAARAYDVAAFHLKG 107
                     69****887.**********854...6**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.3E-3558122IPR001471AP2/ERF domain
PfamPF008474.0E-1258107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-3058117IPR001471AP2/ERF domain
PROSITE profilePS5103223.74958116IPR001471AP2/ERF domain
SuperFamilySSF541713.6E-2058117IPR016177DNA-binding domain
PRINTSPR003671.5E-105970IPR001471AP2/ERF domain
CDDcd000181.15E-3159118No hitNo description
PRINTSPR003671.5E-108197IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MDKEASSLSE TLVTSSAETE ASSKSALTAT SGMKRIRTQD EAAPSPPQDR TLKLQYPTYR  60
GVRRRSWGKW VSEIREPKKK TRIWLGSFDT ADMAARAYDV AAFHLKGKKH ALLNFPELID  120
DIPPPISLSP CHIQAAAAKA AAAFYPKKQE RRRSPRKPPV SKELPSSSSS SHKLCTVFSS  180
VSDPASAEVS GKTDSSNSSS VCRPTERVGE CVAMEYDLFE DFNFFTNLAE ALLLPPPLFT  240
IPEIEVDEEY NLDEGFLWSD S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1850117673Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ABJ62e-97D5ABJ6_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16280.17e-20ERF family protein