PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_139559g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 255aa    MW: 28004.4 Da    PI: 7.4648
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_139559g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_171.21.5e-22147209163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrkq+NRe+ArrsR RK+ae+eeL+++v+eL++eN +L+ el +l++e++kl se+
  MA_139559g0010 147 ERELKRQRRKQSNRESARRSRMRKQAECEELARRVEELKNENVSLRTELARLREECEKLSSEN 209
                     89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165962.9E-925107No hitNo description
Gene3DG3DSA:1.20.5.1702.2E-18144206No hitNo description
PfamPF001702.3E-20147209IPR004827Basic-leucine zipper domain
SMARTSM003389.9E-23147211IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.978149212IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.41E-11150206No hitNo description
CDDcd147021.01E-20152202No hitNo description
PROSITE patternPS000360154169IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MSISAVNKVV FLKAISGLNH IVGEGSHSGQ KTRFEQGSTE ADEAQNGHAT SYNGQSANTN  60
SASGSQVTTM NSSPTMAAVA MSLPVTSGTV TGPMTNLNIG MDYWCVAAPT PLSSMRGQLP  120
VSSTTAAIIP SAQNMPAMGT ELCLQDEREL KRQRRKQSNR ESARRSRMRK QAECEELARR  180
VEELKNENVS LRTELARLRE ECEKLSSENN SLTEQLKNVH DKESRETKVK DELQKADAEH  240
ENCKIILQKQ APENL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163170RRSRMRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1234000.0BT123400.1 Picea sitchensis clone WS04712_M11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011626915.15e-50bZIP transcription factor 16 isoform X1
RefseqXP_011626916.15e-50bZIP transcription factor 16 isoform X1
TrEMBLD5AB031e-156D5AB03_PICSI; Uncharacterized protein
STRINGERN155345e-48(Amborella trichopoda)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.16e-44basic region/leucine zipper transcription factor 16