PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_15251g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 253aa    MW: 27903 Da    PI: 5.1756
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_15251g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-174493255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr ++ +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  MA_15251g0010 44 IYRGVRMRS-WGKWVSEIREPKK---KSRIWLGTFRKPEMAARAHDVAALSIKG 93
                   69****998.**********854...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.87E-3043103No hitNo description
PfamPF008475.8E-114393IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-2044102IPR016177DNA-binding domain
PROSITE profilePS5103221.98344101IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-3044102IPR001471AP2/ERF domain
SMARTSM003803.2E-3544107IPR001471AP2/ERF domain
PRINTSPR003673.1E-94556IPR001471AP2/ERF domain
PRINTSPR003673.1E-96783IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MQNRSGKRRS AESNNAEDSG EEESVVYNGD KQREVIVKGK RHPIYRGVRM RSWGKWVSEI  60
REPKKKSRIW LGTFRKPEMA ARAHDVAALS IKGGSAFLNF PHLASSFLAS SLPRPATLSP  120
RDIQKAAAAS AADFHMPSGE DHNDDRSLDP VGTNIFADTV MSAQPSIKEE SAAAFASNSA  180
WISSFLSENE STIIDDDILF DLPNFFGNMA EGLLVAPPWM LEPEGLYGST YAADNFYDGN  240
GSIYVETSLW NYS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-1739102973Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF6768152e-80EF676815.1 Picea sitchensis clone WS02753_H01 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006399666.18e-45dehydration-responsive element-binding protein 3
TrEMBLB8LM171e-120B8LM17_PICSI; Uncharacterized protein
STRINGXP_006399666.13e-44(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-43ERF family protein