PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_155502g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 192aa    MW: 22050.7 Da    PI: 7.0056
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_155502g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.28.7e-14109167563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     +rerr+ +NRe+ArrsR RK++ ++eL+  v+ + aeN++  +  + l++ + ++  e+
  MA_155502g0010 109 RRERRMLSNRESARRSRMRKQKHLDELRAQVAHMRAENRQILSSFDILTQRYRQVLEEN 167
                     89************************************************999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-15105169IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-8106157No hitNo description
PROSITE profilePS5021711.082107170IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.68E-12109161No hitNo description
PfamPF001707.4E-11109167IPR004827Basic-leucine zipper domain
CDDcd147023.44E-18110161No hitNo description
PROSITE patternPS000360112127IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MQSEQVLLPL SPVISNGCFH MNVDDTRGAQ EFLSRDCYES LLSNSYFMLY PPPTLSNNNS  60
NSSSSPEACK PLPKGCYIRQ DSAASSCQTA CNSASDELEE QQHIINDERR ERRMLSNRES  120
ARRSRMRKQK HLDELRAQVA HMRAENRQIL SSFDILTQRY RQVLEENSLL KTETLELSQR  180
LHQLQQAITA SQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121128RRSRMRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ1012982e-98FJ101298.1 Pinus taeda isolate 5432 anonymous locus 2_6996_01 genomic sequence.
GenBankFJ1012992e-98FJ101299.2 Pinus taeda isolate 5441 anonymous locus 2_6996_01 genomic sequence.
GenBankFJ1013002e-98FJ101300.1 Pinus taeda isolate 5443 anonymous locus 2_6996_01 genomic sequence.
GenBankFJ1013012e-98FJ101301.2 Pinus taeda isolate 5431 anonymous locus 2_6996_01 genomic sequence.
GenBankFJ1013022e-98FJ101302.2 Pinus taeda isolate 5444 anonymous locus 2_6996_01 genomic sequence.
GenBankFJ1013032e-98FJ101303.1 Pinus taeda isolate 5438 anonymous locus 2_6996_01 genomic sequence.
GenBankFJ1013042e-98FJ101304.1 Pinus taeda isolate 5439 anonymous locus 2_6996_01 genomic sequence.
GenBankFJ1013082e-98FJ101308.1 Pinus taeda isolate 5446 anonymous locus 2_6996_01 genomic sequence.
GenBankFJ1013092e-98FJ101309.2 Pinus taeda isolate 5447 anonymous locus 2_6996_01 genomic sequence.
GenBankFJ1013102e-98FJ101310.2 Pinus taeda isolate 5442 anonymous locus 2_6996_01 genomic sequence.
GenBankFJ1013112e-98FJ101311.2 Pinus taeda isolate 5434 anonymous locus 2_6996_01 genomic sequence.
GenBankJQ2628132e-98JQ262813.1 Pinus radiata isolate 5448 hypothetical protein (2_6996_01) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLH9MB626e-69H9MB62_PINRA; Uncharacterized protein (Fragment)
TrEMBLH9WH216e-69H9WH21_PINTA; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5511678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.16e-29basic leucine-zipper 42