PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_175506g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NF-YA
Protein Properties Length: 259aa    MW: 29943.6 Da    PI: 10.6455
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_175506g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA30.51.2e-093162436
       CBFB_NFYA  4 lYVNaKQyqrIlkRRqkRakleeekkldeksrk 36
                    ++VNaKQy++IlkRR +R k e+++k  + +r 
  MA_175506g0010 31 VWVNAKQYRGILKRRLARLKWEQTRKK-TSQRE 62
                    79*********************8885.44443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS511529.6532795IPR001289Nuclear transcription factor Y subunit A
PfamPF020454.3E-83170IPR001289Nuclear transcription factor Y subunit A
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MTMGQETLEP VETNDIGQVK IASSAKTRKW VWVNAKQYRG ILKRRLARLK WEQTRKKTSQ  60
RESTWVLRKK QHSNKSSLQV CGNKSKGKGK VIDDYALYSP TSTPLTWSSD LYVKELLKVK  120
ERLEVVEAKE LERDCTIHRI TAENQALAES NKVLKEKVSL LQEALRIGKT EWQRMKAEVQ  180
NMKKIAVENT ELMNAKPSQD KGKVVTQIDN NEKTSREERK GDSAKLSKTI LLRGKEKQTF  240
RLTTCKIEKA RKDRIEQQT