PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_17614g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

Dof

Protein Properties

Length: 335aa MW: 36501.6 Da PI: 7.8182

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_17614g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.9	2.5e-39	39	99	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+a+kcprC+stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+++ MA_17614g0010 39 AEQAQKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNVPVGGGCRKNKRTK 99 57899*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-27	37	97	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.5E-33	41	97	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.124	43	97	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	45	81	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence Send to blast
MTRISAWQMN AMQERGLKPP DDIMSCSRPL LDRRLKPHAE QAQKCPRCES TNTKFCYYNN 60 YSLSQPRYFC KTCRRYWTKG GTLRNVPVGG GCRKNKRTKR ASDQPVSSQN DASPSTNTTG 120 CEGPSCPTME EPSSTVPGAS TSIYYSIANE GDELAGYPYA RAPLGGCNSN NNTGSLQPSL 180 APLGSLSSLN ALQSLKSSFP GLDLPSCSRP DQGPLNISDL SCLFEAHHQQ QQMNTSSSLP 240 ISHQQKLGVP LEDGQVNMSP LGENIMEGLR PHQQKLRQNN NAKLEDENIR TSAPPVHWQV 300 PPEGFFEAGG DSGYWNGGGT WPDLSGYGPS SSPLI

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT116107	1e-152	BT116107.1 Picea glauca clone GQ03711_P05 mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0D6QVB3	1e-153	A0A0D6QVB3_ARACU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP38	17	445

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-34	TARGET OF MONOPTEROS 6