PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_18454g0020
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 189aa    MW: 21011.6 Da    PI: 10.3713
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_18454g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.74.6e-212676155
            AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++++GVr ++ +gr++AeIrd ++    ++r++lg+f+tae+Aa+a+++a+++l+g
  MA_18454g0020 26 THFRGVRKRP-WGRFAAEIRDpWK----KARVWLGTFDTAEDAARAYDEAARALRG 76
                   589*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.72E-282684No hitNo description
PfamPF008471.0E-132676IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-222785IPR016177DNA-binding domain
SMARTSM003807.7E-352790IPR001471AP2/ERF domain
PROSITE profilePS5103222.6822784IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-312784IPR001471AP2/ERF domain
PRINTSPR003678.4E-112839IPR001471AP2/ERF domain
PRINTSPR003678.4E-115066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MAVETMRRAR VGIGGCESES RAVKETHFRG VRKRPWGRFA AEIRDPWKKA RVWLGTFDTA  60
EDAARAYDEA ARALRGPKAK TNFALAADNT ASAALARTTN ARWTRTLHPQ KQWPHDLKAS  120
SVPALESNKR HKVFLGSDCR PEFESRNNSP CAALSEQKTS SSLRKTPLLL DLNLPPSIDE  180
DNDNESAAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-222485264ATERF1
3gcc_A6e-222485264ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Strongly and quickly induced by ethylene. {ECO:0000269|PubMed:10945353}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1021600.0BT102160.1 Picea glauca clone GQ0167_K20 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010278126.13e-40PREDICTED: ethylene-responsive transcription factor 9-like
SwissprotQ9LW498e-33ERF4_NICSY; Ethylene-responsive transcription factor 4
TrEMBLD5A9F41e-134D5A9F4_PICSI; Uncharacterized protein
STRINGXP_010278126.11e-39(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.19e-25ethylene responsive element binding factor 3