PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_18800g0020
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 145aa    MW: 16134.4 Da    PI: 5.7872
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_18800g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000523203855
                   STCHHHHHHHHHHHHHHH CS
            HLH 38 lsKaeiLekAveYIksLq 55
                   ++Ka+i   A+ YI+sLq
  MA_18800g0020  3 MDKASIIADAIAYIQSLQ 20
                   68***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.1E-5230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MQMDKASIIA DAIAYIQSLQ NKIKEREADV SADQSSTLQH SRSSTDQLIC SSRIESAEVG  60
NYEEKPTKSQ VQQGFKILEL DVTKVEGKTF LIRTSCKKEK GIIMQLTRAL DSLELDIINA  120
SHMTLKGYIL STFLAEVQSY ALSSL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5571678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.18e-14FER-like regulator of iron uptake