PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_19630g0030

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

ZF-HD

Protein Properties

Length: 216aa MW: 22962.7 Da PI: 6.7369

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_19630g0030	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	107.2	9.9e-34	73	129	2	59
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 ++vrY+eClkNhAas+Ggha+DGCg+fmps ge+g+ +alkCaAC+CHRnFHRreve MA_19630g0030 73 KSVRYRECLKNHAASIGGHAIDGCGDFMPS-GEDGSLEALKCAACNCHRNFHRREVEG 129 679************************9.999*******************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD125774	1.0E-22	75	130	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	6.5E-31	75	127	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMs	TIGR01566	5.8E-31	76	127	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	28.068	77	126	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence Send to blast
MELGEHDGDM GVMALPMLYG GPAPNIHESS KLKPGENGTA GTGTPSDETR PSDHELLQHE 60 HHHHQQTVAP AKKSVRYREC LKNHAASIGG HAIDGCGDFM PSGEDGSLEA LKCAACNCHR 120 NFHRREVEGE PPCYYCYSPR SCGGRKRGAG PPMALLGPPA QQQHPINATP LALPPTSAHM 180 VARSLLQGAG DNDQDGSSSM RCCREPATTI KTEAAA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0D6R164	1e-62	A0A0D6R164_ARACU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP91	16	237

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02540.1	6e-31	homeobox protein 21