PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_19854g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 187aa    MW: 20336.8 Da    PI: 4.217
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_19854g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2285.7e-092411355
            AP2 13 grWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +Wv+eIr        +  r++lg++ t+e+Aa a++ a  +l+g
  MA_19854g0010  2 EKWVSEIRMlN-----SsGRIWLGSYHTPEKAACAYDFALYYLRG 41
                   59*******55.....349******************99999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.09149IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-12250IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.1E-17250IPR001471AP2/ERF domain
SMARTSM003803.0E-9355IPR001471AP2/ERF domain
CDDcd000188.06E-14351No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MEKWVSEIRM LNSSGRIWLG SYHTPEKAAC AYDFALYYLR GSKVKLNFLH SPPKIPYASS  60
LSPPQIQAAA AKFTSKEFRL PSDNSVASSS SGLEAECDID AQHITVEKVP AFPDSIPLES  120
LESGDPGGSL NVEDIPPLDV SMEDFGSLES GSPGESLNVE DIPPLDVSME DFGIVFHLME  180
HWGSGVF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001314662.11e-24ethylene-responsive transcription factor ERF017-like
RefseqXP_012452676.19e-25PREDICTED: ethylene-responsive transcription factor ERF017-like
RefseqXP_016682321.18e-25PREDICTED: ethylene-responsive transcription factor ERF017-like
TrEMBLA9NK167e-47A9NK16_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.12e-23ERF family protein