PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_203191g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 191aa    MW: 21312.8 Da    PI: 10.0981
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_203191g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.41.3e-213283156
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++++GVr ++ +gr++AeIrd ++    ++r++lg+f+taeeAa+a+++a+++l+g+
  MA_203191g0010 32 THFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDTAEEAARAYDNAARRLRGH 83
                    589*******.**********883....5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.20E-283292No hitNo description
PfamPF008472.3E-143283IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-223391IPR016177DNA-binding domain
PROSITE profilePS5103222.9063390IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-313390IPR001471AP2/ERF domain
SMARTSM003803.2E-373396IPR001471AP2/ERF domain
PRINTSPR003673.1E-113445IPR001471AP2/ERF domain
PRINTSPR003673.1E-115672IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MHMARMGLGE TMHMARMGLG GCEDESRAVK ETHFRGVRKR PWGRFAAEIR DPWKKTRVWL  60
GTFDTAEEAA RAYDNAARRL RGHKAKTNFS NDHNASAALS WTQTLHPHHH QQQPDLNATA  120
FASISAFVSN KRREVSVGSD RLEFESANNS LRAVSLSEQK ASSSPPKAPL LLDLNLPPTA  180
DQENESAAPW N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-213089262ATERF1
3gcc_A3e-213089262ATERF1
5wx9_A4e-212699581Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1021601e-68BT102160.1 Picea glauca clone GQ0167_K20 mRNA sequence.
GenBankBT1228241e-68BT122824.1 Picea sitchensis clone WS0461_L01 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010278126.17e-40PREDICTED: ethylene-responsive transcription factor 9-like
TrEMBLD5A9F42e-50D5A9F4_PICSI; Uncharacterized protein
TrEMBLE0ZDA61e-50E0ZDA6_PICSI; Ethylene-responsive element binding factor-like protein (Fragment)
STRINGXP_010278126.13e-39(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-22erf domain protein 9