PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_2040g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 202aa    MW: 23177.6 Da    PI: 7.0443
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_2040g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38.2e-181868256
           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                  +y+GVr++  +g+Wv+eIr p++   r+r +lg+f tae Aa a+++a+ +++ge
  MA_2040g0010 18 HYRGVRQRQ-WGKWVSEIRLPRN---RTRLWLGTFETAEAAALAYDRAAYRWRGE 68
                  8*****999.**********955...5*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.4E-311776IPR001471AP2/ERF domain
CDDcd000182.05E-191777No hitNo description
SuperFamilySSF541714.51E-221876IPR016177DNA-binding domain
SMARTSM003806.9E-351881IPR001471AP2/ERF domain
PROSITE profilePS5103222.8271875IPR001471AP2/ERF domain
PfamPF008475.5E-121868IPR001471AP2/ERF domain
PRINTSPR003674.9E-111930IPR001471AP2/ERF domain
PRINTSPR003674.9E-114157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MEKRDKSPVA ARHPVRKHYR GVRQRQWGKW VSEIRLPRNR TRLWLGTFET AEAAALAYDR  60
AAYRWRGECA RLNFPHLFSK KYQNSYASST NGRISRLSCE KSDQEYAYNG DPVRITGYNG  120
DPVQINAYKS DPVRITAYNG DPVGNSASLA ESELESSSSH ESSHAKVERF IWEEEDENWL  180
NNLPVLEADM TWDVLSGCSD LD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-221775463ATERF1
3gcc_A3e-221775463ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ2618581e-129JQ261858.1 Pinus lambertiana isolate 6829 hypothetical protein (0_13096_01) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ9FJQ25e-31ERF57_ARATH; Ethylene-responsive transcription factor ERF057
TrEMBLA9NNQ85e-96A9NNQ8_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65130.16e-25ERF family protein
Publications ? help Back to Top
  1. Ikeuchi M, et al.
    PRC2 represses dedifferentiation of mature somatic cells in Arabidopsis.
    Nat Plants, 2015. 1: p. 15089
    [PMID:27250255]