PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_256188g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 206aa    MW: 23520.1 Da    PI: 4.8055
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_256188g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.52.2e-152675255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++kG+r ++ +g+Wv+eIr p++   r +++lg++ tae+Aa+a +aa+ +l+g
  MA_256188g0010 26 QFKGIRLRE-WGKWVSEIRIPKS---REKIYLGSYNTAEQAARAFDAAMYCLKG 75
                    69*****99.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.2E-262585IPR001471AP2/ERF domain
SMARTSM003802.3E-252689IPR001471AP2/ERF domain
PROSITE profilePS5103219.6912683IPR001471AP2/ERF domain
CDDcd000181.49E-242685No hitNo description
SuperFamilySSF541711.24E-172685IPR016177DNA-binding domain
PfamPF008471.1E-72775IPR001471AP2/ERF domain
PRINTSPR003674.9E-72738IPR001471AP2/ERF domain
PRINTSPR003674.9E-74965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MEKPSLQEHD HAHALPNEDR RQTRRQFKGI RLREWGKWVS EIRIPKSREK IYLGSYNTAE  60
QAARAFDAAM YCLKGTDAKF NFPDSVPAIP SSSSLSRQQI RDAAAKYALN ELPSTSPSHH  120
YNIDNTSKEE PSHSSSVSKM ELSSDDKQKS EDLAFWQSVF AASERDEYLN LEKIPSIDEA  180
MALELIPISQ EEEVDISIDD LWNFDV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LMR53e-65B8LMR5_PICSI; Uncharacterized protein
STRINGXP_010261769.11e-35(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-36ERF family protein