PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_264971g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 364aa    MW: 41407.3 Da    PI: 6.6041
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_264971g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.61.5e-50121391128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Pt+eelvv+yL kk+++ +l++  +i++v++yk++Pw+Lp+k+  +e+ewyfF++rd+ky++g+r+nra+ sgyWkatg dk++++k
  MA_264971g0010  12 LPPGFRFFPTEEELVVHYLSKKAASLPLPV-PIIADVELYKYDPWHLPEKALFGENEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPITAK 105
                     79****************************.88***************8888899***************************************9 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++ vg+kk Lvfy g+ap+g+kt+W+mheyrl
  MA_264971g0010 106 gGKKRVGVKKALVFYVGKAPNGSKTNWLMHEYRL 139
                     66777***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-629164IPR003441NAC domain
PROSITE profilePS5100559.94512165IPR003441NAC domain
PfamPF023654.2E-2613139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MGRRNAEAEL QLPPGFRFFP TEEELVVHYL SKKAASLPLP VPIIADVELY KYDPWHLPEK  60
ALFGENEWYF FTPRDRKYPN GSRPNRAAGS GYWKATGADK PITAKGGKKR VGVKKALVFY  120
VGKAPNGSKT NWLMHEYRLT NVSRPVKNKN SLRLDDWVLC RIYNRRISAE KLALQQKESF  180
NDVPMETIDE KEMENQLTST SIEHSGIEQS NPSFDHLSKL ESSPTCYNAA PSPMNSNICL  240
QNLDFFQNSN TPFSDSTLKA PVQNTAFNPI SSSINHQWTN CNSTDLMSGL HNDSSCSKPS  300
SFSEPISEKE EVQSSFRLEN FSQEQQQSLF NFGLEGLQNT FTHLDQITLP GAYQDWFYPN  360
EPFH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-8041717174Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF0512220.0AF051222.1 Picea mariana ATAF1-like protein (Sb29) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008792531.19e-93NAC domain-containing protein 68-like isoform X2
TrEMBLO650610.0O65061_PICMA; ATAF1-like protein (Fragment)
STRINGXP_008782755.12e-91(Phoenix dactylifera)
STRINGXP_008787999.12e-91(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-81NAC domain containing protein 32