PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_28188g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

G2-like

Protein Properties

Length: 299aa MW: 33548.7 Da PI: 7.7212

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_28188g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.9	1.8e-31	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+ave+LGG+ekAtPk +l++m+vkgL+++hvkSHLQ++R+ MA_28188g0010 19 PRLRWTPQLHQCFVSAVESLGGQEKATPKLVLQIMDVKGLSISHVKSHLQMFRS 72 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.9E-29	15	74	IPR009057	Homeodomain-like
PROSITE profile	PS51294	10.26	15	75	IPR017930	Myb domain
SuperFamily	SSF46689	7.53E-14	19	74	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.2E-22	19	73	IPR006447	Myb domain, plants
Pfam	PF00249	7.6E-7	20	70	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence Send to blast
MGSSGRSGAV RQYVRSNVPR LRWTPQLHQC FVSAVESLGG QEKATPKLVL QIMDVKGLSI 60 SHVKSHLQMF RSMKNDENNH ENESRARQAG FRLERTSQNS QCHFQRDSHN EPSDFSCKID 120 SSGLHSTIIR PSLSRMSIEP GFSLGLRPSI VLDPRNASKE SNRLQKPNMD CSHSTPCASF 180 SYCQPEEPAD TIFMDKDPCL MFQYPRRDNM NLYGNGFGGF GKRKAEEMDD IVQLSLCLNP 240 KKSSTMSCHT DSSLPRSSIE EDEQKCTTGK TDHNIPSIVT SNVNSDDELI KLELRMSIG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	3e-20	20	74	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	3e-20	20	74	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	3e-20	20	74	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	3e-20	20	74	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	4e-20	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP285	15	123

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	1e-31	G2-like family protein