PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_28402g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 111aa    MW: 12875.3 Da    PI: 9.2873
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_28402g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.67.3e-1567110548
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                    +r++r++kNRe+A rsR+R++a++ eLe +v +L +eN +L+ke
  MA_28402g0010  67 RRQKRMIKNRESAARSRARRQAYTNELEIEVNKLIEENARLRKE 110
                    79****************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-1458110No hitNo description
SMARTSM003381.9E-563110IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.24365111IPR004827Basic-leucine zipper domain
PfamPF001702.8E-1267110IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.5E-1067110No hitNo description
PROSITE patternPS0003607085IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MDSVLAGQNL QHPEWLQFHN QHQQFGELSA QANSNNDIPL MAASSGSEHP VWKKRGCESI  60
ADHTVERRQK RMIKNRESAA RSRARRQAYT NELEIEVNKL IEENARLRKE Q
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF6768140.0EF676814.1 Picea sitchensis clone WS02753_G19 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010517591.12e-23PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 3
SwissprotQ9C5Q25e-23AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3
TrEMBLB8LM168e-75B8LM16_PICSI; Uncharacterized protein
STRINGBostr.9345s0024.1.p7e-23(Boechera stricta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP10063711
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.33e-17bZIP family protein
Publications ? help Back to Top
  1. Haas BJ, et al.
    Full-length messenger RNA sequences greatly improve genome annotation.
    Genome Biol., 2002. 3(6): p. RESEARCH0029
    [PMID:12093376]
  2. Sakuraba Y,Han SH,Lee SH,Hörtensteiner S,Paek NC
    Arabidopsis NAC016 promotes chlorophyll breakdown by directly upregulating STAYGREEN1 transcription.
    Plant Cell Rep., 2016. 35(1): p. 155-66
    [PMID:26441053]
  3. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]