PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_314205g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 203aa    MW: 22905.4 Da    PI: 4.3553
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_314205g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.41.7e-132675255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++kG+r ++ +g+Wv+eIr p++   r +++lg++ tae+Aa+a + a+ +l+g
  MA_314205g0010 26 QFKGIRLRE-WGKWVSEIRMPKS---REKIYLGSYNTAEQAARAFDFAMYYLRG 75
                    69*****99.**********954...4***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.6E-262585IPR001471AP2/ERF domain
SMARTSM003803.1E-262689IPR001471AP2/ERF domain
CDDcd000185.62E-252685No hitNo description
SuperFamilySSF541713.07E-182685IPR016177DNA-binding domain
PROSITE profilePS5103219.8092683IPR001471AP2/ERF domain
PRINTSPR003674.8E-72738IPR001471AP2/ERF domain
PfamPF008471.5E-62775IPR001471AP2/ERF domain
PRINTSPR003674.8E-74965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MEKPSPQEYD HANDLPNEDR RQPCRQFKGI RLREWGKWVS EIRMPKSREK IYLGSYNTAE  60
QAARAFDFAM YYLRGSNAKL NFPDSVPAIP SSSSLSPQQI RAAAAKHALN ELPSTSPSLH  120
QEPSQSSSVS EMELSSDDKQ KSEELAFWQS LFAGSDGDGY LNLEKIPSID EAMALEIIPT  180
SQEEEVDISV DEIGLWNFED VFL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-1326831472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ84QC28e-33ERF17_ARATH; Ethylene-responsive transcription factor ERF017
TrEMBLB8LMR52e-65B8LMR5_PICSI; Uncharacterized protein
STRINGEOY302038e-34(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-26ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Li SJ, et al.
    The Citrus transcription factor, CitERF13, regulates citric acid accumulation via a protein-protein interaction with the vacuolar proton pump, CitVHA-c4.
    Sci Rep, 2016. 6: p. 20151
    [PMID:26837571]
  3. Yin XR, et al.
    Involvement of an ethylene response factor in chlorophyll degradation during citrus fruit degreening.
    Plant J., 2016. 86(5): p. 403-12
    [PMID:27037684]